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Laboratory Publications in 2016

Published on 4 January 2019

Alboresi A, Perin G, Vitulo N, Diretto G, Block MA, Jouhet J, Meneghesso A, Valle G, Giuliano G, Maréchal E and Morosinotto T
Light remodels lipid biosynthesis in Nannochloropsis gaditana by modulating carbon partitioning between organelles.
Plant Physiology, 2016, 171(4): 2468-2482

Allorent G, Lefebvre-Legendre L, Chappuis R, Kuntz M, Truong TB, Niyogi KK, Ulm R and Goldschmidt-Clermont M
UV-B photoreceptor-mediated protection of the photosynthetic machinery in Chlamydomonas reinhardtii.
Proceedings of the National Academy of Sciences U S A, 2016, 113(51): 14864-14869

Amiar S, MacRae JI, Callahan DL, van Dooren GG, Shears MJ, Dubois D, Cesbron-Delauw MF, Maréchal E, McConville MJ, McFadden GI, Yamaryo-Botté Y and Botté CY
Apicoplast-localized lysophosphatidic acid precursor assembly is required for bulk phospholipid synthesis in Toxoplasma gondii and relies on an algal/plant-like glycerol 3-phosphate acyltransferase.
PLOS Pathogens, 2016, 12(8): e1005765.
Press release - Communiqué de presse

Aude-Garcia C, Villiers F, Collin-Faure V, Pernet-Gallay K, Jouneau PH, Sorieul S, Mure G, Gerdil A, Herlin-Boime N, Carrière M and Rabilloud T
Different in vitro exposure regimens of murine primary macrophages to silver nanoparticles induce different fates of nanoparticles and different toxicological and functional consequences.
Nanotoxicology, 2016, 10(5): 586-596

Aumeier C, Schaedel L, Gaillard J, John K, Blanchoin L and Théry M
Self-repair promotes microtubule rescue.
Nature Cell Biology, 2016, 18(10): 1054-1064

Bastien O, Botella C, Chevalier F, Block MA, Jouhet J, Breton C, Girard-Egrot A and Maréchal E
New insights on thylakoid biogenesis in plant cells. Chatper 1. In: International review of cell and molecular biology. Edited by Kwang W. Jeon, 2016, 323: 1-30, pp 286

Baud S, Kelemen Z, Thévenin J, Boulard C, Blanchet S, To A, Payre M, Berger N, Effroy-Cuzzi D, Franco-Zorrilla JM, Godoy M, Solano R, Thevenon E, Parcy F, Lepiniec L and Dubreucq B
Deciphering the molecular mechanisms underpinning the transcriptional control of gene expression by L-AFL proteins in Arabidopsis seed.
Plant Physiology, 2016, 171(2): 1099-1112

Botella C, Sautron E, Boudiere L, Michaud M, Dubots E, Yamaryo-Botte Y, Albrieux C, Marechal E, Block MA and Jouhet J
ALA10, a phospholipid flippase, controls FAD2/FAD3 desaturation of phosphatidylcholine in the ER, and affects chloroplast lipid composition in Arabidopsis thaliana.
Plant Physiology, 2016, 170(3): 1300-1314

Bourguignon J, Alban C and Ravanel S
Absorption et distribution des éléments métalliques dans les plantes.
Biofutur, 2016, 35(379): 38-41

Cao L, Henty-Ridilla JL, Blanchoin L and Staiger CJ
Profilin-dependent nucleation and assembly of actin filaments controls Cell elongation in Arabidopsis.
Plant Physiology, 2016, 170(1): 220-233

Carraretto L, Teardo E, Checchetto V, Finazzi G, Uozumi N and Szabo I
Ion channels in plant bioenergetic organelles chloroplast and mitochondria: From molecular identification to function.
Molecular Plant, 2016, 9(3): 371-395

Chahtane H, Denay G, Engelhorn J, Monniaux M, Moyroud E, Moreau F, Carles C, Tichtincky G, Zubieta C and Parcy F
Floral development: An integrated view. In From Molecules to Living Organisms: An Interplay Between Biology and Physics: Lecture Notes of the Les Houches School of Physics: Volume 102, July 2014 (Lecture Notes of the Les Houches Summer School), Session CII, (E. Pebay-Peyroula, H. Nury, F. Parcy, R.W.H. Ruigrok, C. Ziegler and L.F. Cugliandolo, Eds) Oxford University Press, 2016, pp 464

Chevalier F, Cuyàs Carrera L, Nussaume L and Maréchal E
Chemical genetics in dissecting membrane glycerolipid functions. In: Lipids in Plant and Algae Development (Y. Nakamura and Y. Li-Beisson, Eds), Springer, 2016, 159-175

Curien G, Flori S, Villanova V, Magneschi L, Giustini C, Forti G, Matringe M, Petroutsos D, Kuntz M and Finazzi G
The water to water cycles in microalgae.
Plant and Cell Physiology, 2016, 57(7): 1354-1363

Curien G, Giustini C, Montillet JL, Mas-Y-Mas S, Cobessi D, Ferrer JL, Matringe M, Grechkin A and Rolland N
The chloroplast membrane associated ceQORH putative quinone oxidoreductase reduces long-chain, stress-related oxidized lipids.
Phytochemistry, 2016, 122: 45-55

Dell'Aglio E, Salvi D, Kraut A, Baudet M, Macherel D, Neveu M, Ferro M, Curien G and Rolland N
No plastidial Calmodulin-like proteins detected by two targeted mass-spectrometry approaches and GFP fusion proteins.
New Negatives in Plant Science, 2016, 3: 19–26

Ennomani H, Letort G, Guérin C, Martiel JL, Cao W, Nédélec F, De La Cruz EM, Théry M and Blanchoin L
Architecture and connectivity govern actin network contractility.
Current Biology, 2016, 26(5): 616-626

Falconet D
Le microscope pour décrypter l’architecture du vivant. In: La Lumière en lumière, du photon à l'internet. (B. Boulanger, S. Guellati-Khelifa, D. Hennequin, M. Stehle, Eds), edp Sciences, France, 2016, pp 49-52

Farina F, Gaillard J, Guérin C, Couté Y, Sillibourne J, Blanchoin L and Théry M
The centrosome is an actin-organizing centre.
Nature Cell Biology, 2016, 18(1): 65-75

Finazzi G and Johnson GN
Cyclic electron flow: Facts and hypotheses.
Photosynthesis Research, 2016, 129(3): 227-230

Finazzi G, Minagawa J and Johnson GN
Chapter 22: The cytochrome b 6 f complex: A regulatory hub controlling electron flow and the dynamics of photosynthesis? In: Cytochrome complexes: Evolution, structures, energy transduction, and signaling. (W. A. Cramer and T. Kallas, Eds), Series: Advances in Photosynthesis and Respiration, Springer. 2016, 41: 437-452

Flori S, Jouneau PH, Finazzi G, Maréchal E and Falconet D
Ultrastructure of the periplastidial compartment of the diatom Phaeodactylum tricornutum.
Protist, 2016, 167(3): 254–267

Hochmal AK, Zinzius K, Charoenwattanasatien R, Gäbelein P, Mutoh R, Tanaka H, Schulze S, Liu G, Scholz M, Nordhues A, Offenborn JN, Petroutsos D, Finazzi G, Fufezan C, Huang K, Kurisu G and Hippler M
Calredoxin represents a novel type of calcium-dependent sensor-responder connected to redox regulation in the chloroplast.
Nature Communications, 2016, 7: 11847

Huta BP, Mehlenbacher MR, Nie Y, Lai X, Zubieta C, Bou-Abdallah F and Doyle RP
The lysosomal protein saposin B binds chloroquine.
ChemMedChem, 2016, 11(3): 277-282

Kanno S, Cuyas L, Javot H, Bligny R, Gout E, Dartevelle T, Hanchi M, Nakanishi TM, Thibaud MC and Nussaume L
Performance and limitations of Phosphate quantification: Guidelines for plant biologists.
Plant & Cell Physiology, 2016, 57(4): 690-706

Leonardo T, Farhi E, Pouget S, Motellier S, Boisson AM, Banerjee D, Rébeillé F, den Auwer C and Rivasseau C
Silver accumulation in the green microalga Coccomyxa actinabiotis: Toxicity, in situ speciation, and localization investigated using synchrotron XAS, XRD, and TEM.
Environmental Science and Technology, 2016, 50(1): 359-367

Letort G, Nedelec F, Blanchoin L and Théry M
Centrosome centering and decentering by microtubule network rearrangement.
Molecular Biology of the Cell, 2016, 27(18): 2833-2843

Lupette J, Lami R, Krasovec M, Grimsley N, Moreau H, Piganeau G and Sanchez-Ferandin S
Marinobacter dominates the bacterial community of the Ostreococcus tauri phycosphere in culture.
Frontiers in Microbiology, 2016, 7: Article number 1414

Ma S, Martin-Laffon J, Mininno M, Gigarel O, Brugiere S, Bastien O, Tardif M, Ravanel S and Alban C
Molecular evolution of the substrate specificity of chloroplastic aldolases/rubisco lysine methyltransferases in plants.
Molecular Plant, 2016, 9(4): 569-581

Mandel T, Candela H, Landau U, Asis L, Zelinger E, Carles CC and Williams LE
Differential regulation of meristem size, morphology and organization by the ERECTA, CLAVATA and class III HD-ZIP pathways.
Development, 2016, 143(9): 1612-1622

Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A and Wasserman WW
JASPAR 2016: A major expansion and update of the open-access database of transcription factor binding profiles.
Nucleic Acids Research, 2016, 44(D1): D110-D115

Mayerhofer H, Sautron E, Rolland N, Catty P, Seigneurin-Berny D, Pebay-Peyroula E and Ravaud S
Structural insights into the Nucleotide-Binding Domains of the P1B-type ATPases HMA6 and HMA8 from Arabidopsis thaliana.
PLoS One, 2016, 11(11): e0165666

Meneghesso A, Simionato D, Gerotto C, La Rocca N, Finazzi G and Morosinotto T
Photoacclimation of photosynthesis in the Eustigmatophycean Nannochloropsis gaditana.
Photosynthesis Research, 2016, 129(3): 291-305

Michaud M, Gros V, Tardif M, Brugière S, Ferro M, Prinz W, Toulmay A, Mathur J, Wozny M, Falconet D, Maréchal E, Block M and Jouhet J
AtMic60 is involved in plant mitochondria lipid trafficking and is part of a large complex.
Current Biology, 2016, 26(5): 627-639

Moreau F, Thevenon E, Blanvillain R, Lopez-Vidriero I, Franco-Zorrilla JM, Dumas R, Parcy F, Morel P, Trehin C and Carles CC
The Myb-domain protein ULTRAPETALA1 INTERACTING FACTOR 1 controls floral meristem activities in Arabidopsis.
Development, 2016, 143(7): 1108-1119

Obino D, Farina F, Malbec O, Sáez PJ, Maurin M, Gaillard J, Dingli F, Loew D, Gautreau A, Yuseff MI, Blanchoin L, Théry M and Lennon-Duménil AM
Actin nucleation at the centrosome controls lymphocyte polarity.
Nature Communications, 2016, 7: 10969

Parcy F, Vernoux T and Dumas R
A glimpse beyond structures in auxin-dependent transcription.
Trends in Plant Science, 2016, 21(7): 574-583

Pebay-Peyroula E, Nury H, Parcy F, Ruigrok RWH, Ziegler C and Cugliandolo LF
From Molecules to Living Organisms: An Interplay Between Biology and Physics: Lecture Notes of the Les Houches School of Physics: Volume 102, July 2014 (Lecture Notes of the Les Houches Summer School), Session CII, Oxford University Press, 2016, pp 464

Petroutsos D, Tokutsu R, Maruyama S, Flori S, Greiner A, Magneschi L, Cusant L, Kottke T, Mittag M, Hegemann P, Finazzi G and Minagawa J
A blue-light photoreceptor mediates the feedback regulation of photosynthesis.
Nature, 2016, 537(7621): 563-566

Ricroch AE, Ammann K and Kuntz M
Editing EU legislation to fit plant genome editing: The use of genome editing technologies in plant breeding requires a novel regulatory approach for new plant varieties that involves farmers.
EMBO Reports, 2016, 17(10): 1365-1369

Ricroch A, Harwood W, Svobodová Z, Sági L, Hundleby P, Badea EM, Rosca I, Cruz G, Salema Fevereiro MP, Marfà Riera V, Jansson S, Morandini P, Bojinov B, Cetiner S, Custers R, Schrader U, Jacobsen HJ, Martin-Laffon J, Boisron A and Kuntz M
Challenges facing European agriculture and possible biotechnological solutions.
Critical Reviews in Biotechnology, 2016, 36(5): 875-883

Rivasseau C, Farhi E, Compagnon E, de Gouvion Saint Cyr D, van Lis R, Falconet D, Kuntz M, Atteia A and Couté A
Coccomyxa actinabiotis sp. nov. (Trebouxiophyceae, Chlorophyta), a new green microalga living in the spent fuel cooling pool of a nuclear reactor.
Journal of Phycology, 2016, 52: 689-703

Robin AY, Giustini C, Graindorge M, Matringe M and Dumas R
Crystal structure of norcoclaurine-6-O-methyltransferase, a key rate-limiting step in the synthesis of benzylisoquinoline alkaloids.
Plant Journal, 2016, 87(6): 641-653

de Sanctis D, Zubieta C, Felisaz F, Caserotto H and Nanao MH
Radiation-damage-induced phasing: A case study using UV irradiation with light-emitting diodes.
Acta Crystallographica, Section D, Structural Biology, 2016, 72(Pt 3): 395-402

Sautron E, Giustini C, Dang T, Moyet L, Salvi D, Crouzy S, Rolland N, Catty P and Seigneurin-Berny D
Identification of two conserved residues involved in copper release from chloroplast PIB-1-ATPases.
Journal of Biological Chemistry, 2016, 291(38): 20136–20148

Sayou C, Nanao MH, Jamin M, Posé D, Thévenon E, Grégoire L, Tichtinsky G, Denay G, Ott F, Peirats Llobet M, Schmid M, Dumas R and Parcy F
A SAM oligomerization domain shapes the genomic binding landscape of the LEAFY transcription factor.
Nature Communications 2016, 7: 11222
Abstract - Reprint - Communiqué de presse - Press release
3D pictures of LEAFY - Images de LEAFY

Seigneurin-Berny D, King MS, Sautron E, Moyet L, Catty P, André F, Rolland N, Kunji ER and Frelet-Barrand A
Membrane protein production in Lactococcus lactis for functional studies, In Heterologous Expression of Membrane Proteins Methods and Protocols. Editors: Mus-Veteau, Isabelle (Ed.)
Methods in Molecular Biology, 2016, 1432: 79-101

Silva CS, Lai X, Nanao M and Zubieta C
The Myb domain of LUX ARRHYTHMO in complex with DNA: Expression, purification and crystallization.
Acta Crystallographica, Section F Structural Biology Communications, 2016, 72 (Pt 5): 356-361

Silva CS, Puranik S, Round A, Brennich M, Jourdain A, Parcy F, Hugouvieux V and Zubieta C
Evolution of the plant reproduction master regulators LFY and the MADS transcription factors: The role of protein structure in the evolutionary development of the flower.
Frontiers in Plant Science, 2016, 6: article number 1193

Stopka SA, Mansour TR, Shrestha B, Maréchal E, Falconet D and Vertes A
Turnover rates in microorganisms by laser ablation electrospray ionization mass spectrometry and pulse-chase analysis.
Analytica Chimica Acta, 2016, 902: 1-7

Sun Z, Tseng HY, Tan S, Senger F, Kurzawa L, Dedden D, Mizuno N, Wasik AA, Thery M, Dunn AR and Fässler R
Kank2 activates talin, reduces force transduction across integrins and induces central adhesion formation.
Nature Cell Biology, 2016, 18(9): 941-953

Suorsa M, Rossi F, Tadini L, Labs M, Colombo M, Jahns P, Kater MM, Leister D, Finazzi G, Aro EM, Barbato R and Pesaresi P
PGR5-PGRL1-dependent cyclic electron transport modulates linear electron transport rate in Arabidopsis thaliana.
Molecular Plant, 2016, 9(2): 271-288

Taddei L, Stella GR, Rogato A, Bailleul B, Fortunato AE, Annunziata R, Sanges R, Thaler M, Lepetit B, Lavaud J, Jaubert M, Finazzi G, Bouly JP and Falciatore A
Multisignal control of expression of the LHCX protein family in the marine diatom Phaeodactylum tricornutum.
Journal of Experimental Botany, 2016, 67(13): 3939-3951

Westfall CS, Sherp AM, Zubieta C, Alvarez S, Schraft E, Marcellin R, Ramirez L and Jez JM
GH3.5 acyl acid amido synthetase mediates metabolic crosstalk in auxin and salicylic acid homeostasis.
Proceedings of the National Academy of Sciences U S A, 2016, 113(48): 13917-13922

Zander U, Cianci M, Foos N, Silva CS, Mazzei L, Zubieta C, de Maria A and Nanao MH
Merging of synchrotron serial crystallographic data by a genetic algorithm.
Acta Crystallographica D Structural Biology, 2016, 72(Pt 9): 1026-1035

Zubieta C and Nanao MH
Practical radiation damage-induced phasing. In Nucleic acid crystallography: Methods and protocols. (E. Ennifar, Ed), Series: Methods in Molecular Biology, Springer, 2016, 1320: 205-218