You are here : Home > LPCV > Laboratory Publications in 2011

Laboratory Publications in 2011

Published on 4 January 2019

Agrawal GK, Bourguignon J, Rolland N, Ephritikhine G, Ferro M, Jaquinod M, Alexiou KG, Chardot T, Chakraborty N, Jolivet P, Doonan JH and Rakwal R
Plant organelle proteomics: Collaborating for optimal cell function.
Mass Spectrometry Reviews, 2011, 211(30): 772-853

Alban C
Chapter 2 - Biotin (vitamin B8) synthesis in Plants (Edited by Fabrice Rébeillé and Roland Douce), In: Biosynthesis of Vitamins in Plants Part B. Advances in Botanical Research, Elsevier Limited Academic Press, 2011, Vol 59, pp. 39-66

Benlloch R, Kim MC, Sayou C, Thévenon E, Parcy F and Nilsson O
Integrating long-day flowering signals: A LEAFY binding site is essential for proper photoperiodic activation of APETALA1.
Plant Journal, 2011, 67(6): 1094-1102

Bernaudat F, Frelet-Barrand A, Pochon N, Dementin S, Hivin P, Boutigny S, Rioux JB, Salvi D, Seigneurin-Berny D, Richaud P, Joyard J, Pignol D, Darrouzet E, Sabaty M, Desnos T, Pebay-Peyroula E, Vernet T and Rolland N
Heterologous expression of membrane proteins: choosing the appropriate host
PloS One, 2011, 6(12): e29191

Botté CY, Deligny M, Roccia A, Bonneau AL, Saïdani N, Hardré H, Aci S, Yamaryo-Botté Y, Jouhet J, Dubots E, Loizeau K, Bastien O, Bréhélin L, Joyard J, Cintrat JC, Falconet D, Block MA, Rousseau B, Lopez R and Maréchal E
Chemical inhibitors of mono galactosyldiacylglycerol synthases in Arabidopsis thaliana.
Nature Chemical Biology, 2011, 7(11): 834–842

Botté CY, Yamaryo-Botté Y, Janouskovec J, Rupasinghe T, Keeling PJ, Crellin P, Coppel RL, Maréchal E, McConville MJ and McFadden GI
Identification of plant-like galactolipids in Chromera velia, a photosynthetic relative of malaria parasites.
Journal of Biological Chemistry, 2011, 286: 29893-29903

Camara D, Richefeu-Contesto C, Gambonnet B, Dumas R and Rébeillé F
The synthesis of pABA: Coupling between the glutamine amidotransferase and aminodeoxychorismate synthase domains of the bifunctional aminodeoxychorismate synthase from Arabidopsis thaliana.
Archives of Biochemistry and Biophysics, 2011, 505(1): 83-90

Cardol P, Forti G and Finazzi G
Regulation of electron transport in microalgae.
Biochimica et Biophysa Acta - Bioenergetics, 2011, 1807: 912-918

Catty P, Boutigny S, Miras R, Joyard J, Rolland N and Seigneurin-Berny D
Biochemical characterization of AtHMA6/PAA1, a chloroplast envelope Cu(I)-ATPase.
Journal of Biological Chemistry, 2011, 286(42): 36188–36197

Chesarone-Cataldo M, Guérin C, Yu Jerry H, Wedlich-Soldner R, Blanchoin L and Goode Bruce L
The myosin passenger protein Smy1 controls actin cable structure and dynamics by acting as a formin damper.
Developmental Cell, 2011, 21(2): 217-230

De Luca G, Barakat M, Ortet P, Fochesato S, Jourlin-Castelli C, Ansaldi M, Py B, Fichant G, Coutinho PM, Voulhoux R, Bastien O, Marechal E, Henrissat B, Quentin Y, Noirot P, Filloux A, Mejean V, DuBow MS, Barras F, Barbe V, Weissenbach J, Mihalcescu I, Vermeglio A, Achouak W and Heulin T
The cyst-dividing bacterium Ramlibacter tataouinensis TTB310 genome reveals a well-stocked toolbox for adaptation to a desert environment.
Plos One, 2011, 6(9): e23784

Deniaud A, Bernaudat F, Frelet-Barrand A, Juillan-Binard C, Vernet T, Rolland N and Pebay-Peyroula E
Expression of a chloroplast ATP/ADP transporter in E. coli membranes: Behind the Mistic strategy.
Biochimica et Biophysica Acta - Biomembranes, 2011, 1808: 2059-2066

Effantin G, Rivasseau C, Gromova M, Bligny R and Hugouvieux-Cotte-Pattat N
Massive production of butanediol during plant infection by phytopathogenic bacteria of the genera Dickeya and Pectobacterium.
Molecular Microbiology, 2011, 82(4): 988-997

Fan J, Crooks C, Creissen G, Hill L, Fairhurst S, Doerner P and Lamb C
Pseudomonas sax genes overcome aliphatic isothiocyanate-mediated non-host resistance in Arabidopsis.
Science, 2011, 331(6021): 1185-1188

Gaffe J, Lemercier C, Alcaraz JP and Kuntz M
Identification of three tomato flower and fruit MADS-box proteins with a putative histone deacetylase binding domain.
Gene, 2011, 471(1-2): 19-26

Gaillard J, Ramabhadran V, Neumanne E, Gurel P, Blanchoin L, Vantard M and Higgs HN
Differential interactions of the formins INF2, mDia1, and mDia2 with microtubules.
Molecular Biology of the Cell, 2011, 22(23): 4575-4587

Gamm M, Heloir MC, Bligny R, Vaillant-Gaveau N, Trouvelot S, Alcaraz G, Frettinger P, Clement C, Pugin A, Wendehenne D and Adrian M
Changes in carbohydrate metabolism in Plasmopara viticola infected grapevine leaves.
Molecular Plant Microbe Interactions, 2011, 24(9): 1061-1073

Ghouila A, Terrapon N, Gascuel O, Guerfali FZ, Laouini D, Maréchal E and Bréhélin L
EuPathDomains: The divergent domain database for eukaryotic pathogens.
Infection Genetics and Evolution, 2011, 11(4): 698-707

Gould CJ, Maiti S, Michelot A, Graziano BR, Blanchoin L and Goode BL
The formin DAD domain plays dual roles in autoinhibition and actin nucleation.
Current Biology, 2011, 21(5): 384-390

Gout E, Bligny R, Douce R, Boisson AM and Rivasseau C
Early response of plant cell to carbon deprivation: in vivo 31P-NMR spectroscopy shows a quasi-instantaneous disruption on cytosolic sugars, phosphorylated intermediates of energy metabolism, phosphate partitioning, and intracellular pHs.
New Phytologist, 2011, 189(1): 135-147

Graziano BR, DuPage AG, Michelot A, Breitsprecher D, Moseley JB, Sagot I, Blanchoin L and Goode BL
Mechanism and cellular function of Bud6 as an actin nucleation-promoting factor.
Molecular Biology of the Cell, 2011, 22(21): 4016-4028

Henty JL, Bledsoe SW, Khurana P, Meagher RB, Day B, Blanchoin L and Staiger CJ
Arabidopsis actin depolymerizing factor4 modulates the stochastic dynamic behavior of actin filaments in the cortical array of epidermal cells.
Plant Cell, 2011, 23(10): 3711-3726

Joshi HJ, Hirsch-Hoffmann M, Baerenfaller K, Gruissem W, Baginsky S, Schmidt R, Schulze WX, Sun Q, van Wijk KJ, Egelhofer V, Wienkoop S, Weckwerth W, Bruley C, Rolland N, Toyoda T, Nakagami H, Jones AM, Briggs SP, Castleden I, Tanz SK, Millar AH and Heazlewood JL
MASCP Gator: An aggregation portal for the visualization of Arabidopsis proteomics data.
Plant Physiology, 2011, 155(1): 259-270

Karamoko M, El-Kafafi ES, Mandaron P, Lerbs-Mache S and Falconet D
Multiple FtsZ2 isoforms involved in chloroplast division and biogenesis are developmentally associated with thylakoid membranes in Arabidopsis.
FEBS Letters, 2011, 585(8): 1203-1208

Laureau C, Bligny R and Streb P
The significance of glutathione for photoprotection at contrasting temperatures in the alpine plant species Soldanella alpina and Ranunculus glacialis.
Physiologia plantarum, 2011, 143(3): 246-260

Lerbs-Mache S
Function of plastid sigma factors in higher plants: Regulation of gene expression or just preservation of constitutive transcription?
Plant Molecular Biology, 2011, 76(3-5): 235-249

Lespinats S, Grando D, Maréchal E, Hakimi MA, Tenaillon D and Bastien O
How fitch-margoliash algorithm can benefit from multi dimensional scaling.
Evolutionary bioinformatics, 2011, 7: 61-85

Maréchal E, Roy S and Lafanechère L
Chemogenomics and Chemical Genetics: A User's Introduction for Biologists, Chemists and Informaticians
Springer-Verlag Berlin and Heidelberg, 2011, 270 pages

Maréchal E, Riou M, Kerboeuf D, Beugnet F, Chaminade P and Loiseau PM
Membrane lipidomics for the discovery of new antiparasitic drug targets.
Trends in Parasitology, 2011, 27(11): 496-504

McCullough BR, Grintsevich EE, Chen CK, Kang H, Hutchison AL, Henn A, Cao W, Suarez C, Martiel JL, Blanchoin L, Reisler E and de La Cruz EM
Cofilin-linked changes in actin filament flexibility promote severing.
Biophysical Journal, 2011, 101(1): 151-159

Mongelard G, Seemann M, Boisson AM, Rohmer M, Bligny R and Rivasseau C
Measurement of carbon flux through the MEP pathway for isoprenoid synthesis by 31P-NMR spectroscopy after specific inhibition of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate reductase. Effect of light and temperature.
Plant Cell and Environment, 2011, 34(8): 1241-1247

Moyroud E, Minguet EG, Ott F, Yant L, Posé D, Monniaux M, Blanchet S, Bastien O, Thévenon E, Weigel D, Schmid M and Parcy F
Prediction of regulatory interactions from genome sequences using a biophysical model for the Arabidopsis LEAFY transcription factor.
Plant Cell, 2011, 23(4): 1293-1306

Nussaume L, Maréchal E, Thibaud C and Block MA
Plant plasma membrane and phosphate deprivation In Plant Cell Monographs, Series. Murphy, A.S. and al. Eds., 2011, vol.19, Springer Verlag, pp 237-251

Parcy F and Lohmann JU
June bloom in Maratea.
Development, 2011, 138(20): 4335-4340

Perazza D, Laporte F, Balague C, Chevalier F, Remo S, Bourge M, Larkin J, Herzog M and Vachon G
GeBP/GPL transcription factors regulate a subset of CPR5-dependent processes.
Plant Physiology, 2011, 157: 1232-1242

Raspail C, Graindorge M, Moreau Y, Crouzy S, Lefebvre B, Robin AY, Dumas R and Matringe M
4-hydroxyphenylpyruvate dioxygenase catalysis: Identification of catalytic residues and production of a hydroxylated intermediate shared with a structurally unrelated enzyme.
Journal of Biological Chemistry, 2011, 286(29): 26061-26070

Ravanel S, Douce R and Rébeillé F
Chapter 3 - Metabolism of folates in plants. In: Biosynthesis of Vitamins in Plants Part B. Advances in Botanical Research, (Fabrice Rébellé and Roland Douce Eds.), Academic Press, 2011, Volume 59, pp. 67-106

Regis-Faro A, Carpentier P, Jonasson G, Pompidor G, Arcizet D, Demachy I and Bourgeois D
Low-temperature chromophore isomerization reveals the photoswitching mechanism of the fluorescent protein Padron.
Journal of the American Chemical Society, 2011, 133(41): 16362-16365

Reiland S, Finazzi G, Endler A, Willig A, Baerenfaller K, Grossmann J, Gerrits B, Rutishauser D, Gruissem W, Rochaix JD and Baginsky S
Comparative phosphoproteome profiling reveals a function of the STN8 kinase in fine-tuning of cyclic electron flow (CEF).
Proceeding of the National Academy of Sciences USA, 2011, 108(31): 12955-12960

Reymann AC, Suarez C, Guerin C, Martiel JL, Staiger CJ, Blanchoin L and Boujemaa-Paterski R
Turnover of branched actin filament networks by stochastic fragmentation with ADF/cofilin.
Molecular Biology of the Cell, 2011, 22(14): 2541-2550

Ricroch AE, Berge JB and Kuntz M
Evaluation of genetically engineered crops using transcriptomic, proteomic, and metabolomic profiling techniques.
Plant Physiology, 2011, 155(4): 1752-1761

Rodor J, Jobet E, Bizarro J, Vignols F, Carles C, Suzuki T, Nakamura K and Echeverria M
AtNUFIP, an essential protein for plant development, reveals the impact of snoRNA gene organisation on the assembly of snoRNPs and rRNA methylation in Arabidopsis thaliana.
Plant Journal, 2011, 65(5): 807-819

Rolland N and Kuntz M
La protéomique des plantes. Dattée Y, Fellous M, Gallais A, Joudrier P, Pelletier G and Ricroch A. Eds. In: Nourrir et protéger l'homme et l'environnement, AFBV (Association Française des Biotechnologies Végétales), 2011, pp. 90-97

Rouached H, Stefanovic A, Secco D, Vidoudez C, Gout E, Bligny R and Poirier Y
Uncoupling phosphate deficiency from its effects on growth and transcriptome via PHO1 expression in Arabidopsis.
Plant Journal, 2011, 65(4): 557-570

Salvi D, Moyet L, Seigneurin-Berny D, Ferro M, Joyard J and Rolland N
Preparation of envelope membrane fractions from Arabidopsis chloroplasts for proteomic analysis and other studies.
Methods in Molecular Biology, 2011, 775: 189-206

Stefanovic A, Bulak Arpat A, Bligny R, Gout E, Vidoudez C, Bensimon M and Poirier Y
Over-expression of PHO1 in Arabidopsis leaves reveals its role in mediating phosphate efflux.
Plant Journal, 2011, 66(4): 689-699

Suarez C, Roland J, Boujemaa-Paterski R, Kang H, McCullough BR, Reymann AC, Guérin C, Martiel JL, De La Cruz EM and Blanchoin L
Cofilin modulates the nucleotide state of actin filaments and severs at boundaries of bare and decorated segments.
Current Biology, 2011, 21(10): 862-868

Tcherkez G, Mahe A, Boex-Fontvieille E, Gout E, Guerard and Bligny R
Experimental evidence of phosphoenolpyruvate resynthesis from pyruvate in illuminated leaves.
Plant Physiology, 2011, 157: 86-95

Tseng Q, Wang I, Duchemin-Pelletier E, Azioune A, Carpi N, Gao J, Filhol O, Piel M, Thery M and Balland M
A new micropatterning method of soft substrates reveals that different tumorigenic signals can promote or reduce cell contraction levels.
Lab on a Chip, 2011, 11(13): 2231-2240

Villiers F, Ducruix C, Hugouvieux V, Jarno N, Ezan E, Garin J, Junot C and Bourguignon J
Investigating the plant response to cadmium exposure by proteomic and metabolomic approaches.
Proteomics, 2011, 11(9): 1650-1663

Wieczorek S, Aci S, Bisson G, Gordon M, Lafanechere L, Maréchal É and Roy S
Clustering libraries of compounds into families: Asymmetry-based similarity measure to categorize small molecules In Bioinformatics - Computational Biology and Modeling, InTech, 2011, pp. 229-244

Winter CM, Austin RS, Blanvillain-Baufumé S, Reback MA, Monniaux M, Wu MF, Sang Y, Yamaguchi A, Yamaguchi N, Parker JE, Parcy F, Jensen ST, Li H and Wagner D
LEAFY target genes reveal floral regulatory logic, cis motifs, and a link to biotic stimulus response.
Developmental Cell, 2011, 20(4): 430-443

Zghidi-Abouzid O, Merendino L, Buhr F, Malik Ghulam M and Lerbs-Mache S
Characterization of plastid psbT sense and antisense RNAs.
Nucleic Acids Research, 2011, 39(13): 5379-5387