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Chapter 21. A toolkit for the characterization of the photoprotective capacity of green algae. In: Plastids - Methods and Protocols. (E. Maréchal, Ed.), Humana Press, New-York, USA, Methods in Molecular Biology, 2018, 1829: 315-323 |
| | Alban C and Journet EP
Chapter 10. Purification of nongreen plastids (proplastids and amyloplasts) from angiosperms, and isolation of their envelope membranes. In: Plastids - Methods and Protocols. (E. Maréchal, Ed.), Humana Press, New-York, USA, Methods in Molecular Biology, 2018, 1829: 145-164 |
Allorent G, Byrdin M, Carraretto L, Morosinotto T, Szabo I and Finazzi G
Global spectroscopic analysis to study the regulation of the photosynthetic proton motive force: A critical reappraisal.
Biochimica et Biophysica Acta - Bioenergetics, 2018,
1859(9): 676-683
| | Allorent G, Guglielmino E, Giustini C and Courtois F
Chapter 24. Generation of mutants of nuclear-encoded plastid proteins using CRISPR/Cas9 in the diatom Phaeodactylum tricornutum. In: Plastids - Methods and Protocols. (E. Maréchal, Ed.), Humana Press, New-York, USA, Methods in Molecular Biology, 2018, 1829: 367-378 |
Amato A, Sabatino V, Nylund GM, Bergkvist J, Basu S, Andersson MX, Sanges R, Godhe A, Kiørboe T, Selander E and Ferrante MI
Grazer-induced transcriptomic and metabolomic response of the chain-forming diatom
Skeletonema marinoi.
ISME Journal, 2018,
12(6): 1594-1604
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Antibody-based detection of global nuclear DNA methylation in cells, tissue sections, and mammalian embryos.
Methods in Molecular Biology, 2018, 1708: 59-80 |
Berthet S, Villiers F, Alban C, Serre N, Martin-Laffon J, Figuet S, Boisson AM, Bligny R, Kuntz M, Finazzi G, Ravanel S and Bourguignon J
Arabidopsis thaliana plants challenged with uranium reveal new insights into iron and phosphate homeostasis.
New Phytologist, 2018,
217(2): 657-670
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Regulation of respiration by cellular key parameters: Energy demand, ADP, and Mg 2+. In: Plant Respiration: Metabolic Fluxes and Carbon Balance. (G. Tcherkez and J. Ghashghaie, Eds), Series: Advances in Photosynthesis and Respiration. Springer. 2017, 43: 19-41 |
Blin G, Wisniewski D, Picart C, Thery M, Puceat M and Lowell S
Geometrical confinement controls the asymmetric patterning of brachyury in cultures of pluripotent cells.
Development, 2018, 145(18): dev166025
| | Block M
Chapter 9. Isolation of inner and outer membranes of the chloroplast envelope from Spinach and Pea. In: Plastids - Methods and Protocols. (E. Maréchal, Ed.), Humana Press, New-York, USA, Methods in Molecular Biology, 2018, 1829: 137-144 |
| | Block M
Chapter 11. In vitro protein import into isolated chloroplasts. In: Plastids - Methods and Protocols. (E. Maréchal, Ed.), Humana Press, New-York, USA, Methods in Molecular Biology, 2018, 1829: 165-171 |
| | Block M and Albrieux C
Chapter 8. Purification of chloroplasts and chloroplast subfractions: Envelope, thylakoids, and stroma—From Spinach, Pea, and Arabidopsis thaliana. In: Plastids - Methods and Protocols. (E. Maréchal, Ed.), Humana Press, New-York, USA, Methods in Molecular Biology, 2018, 1829: 123-135 |
Bouchnak I, Moyet L, Salvi D, Kuntz M and Rolland N
Preparation of chloroplast subcompartments for the analysis of protein localization by immunoblotting or proteomics and other studies.
Journal of Visualized Experiments, 2018,
140: e58581
Cenci U, Sibbald SJ, Curtis BA, Kamikawa R, Eme L, Moog D, Henrissat B, Maréchal E, Chabi M, Djemiel C, Roger AJ, Kim E and Archibal JM
Nuclear genome sequence of the plastid-lacking cryptomonad
Goniomonas avonlea provides insights into the evolution of secondary plastids.
BMC Biology, 2018,
16(1): 137
Chahtane H, Zhang B, Norberg M, LeMasson M, Thévenon E, Bako L, Benlloch R, Holmlund M, Parcy F, Nilsson O and Vachon G
LEAFY activity is post-transcriptionally regulated by BLADE ON PETIOLE2 and CULLIN3 in Arabidopsis.
New Phytologist, 2018,
220(2): 579-592
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Chapter 17. Determination of the DNA/RNA-associated subproteome from chloroplasts and other plastid types. In: Plastids - Methods and Protocols. (E. Maréchal, Ed.), Humana Press, New-York, USA, Methods in Molecular Biology, 2018, 1829: 253-271 |
Colin A, Singaravelu P, Théry M, Blanchoin L, Gueroui Z
Actin network architecture regulates microtubule dynamics.
Current Biology, 2018,
28(16): 2647-2656
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Chapter 18. Mapping plastid transcript population by circular reverse transcription Polymerase Chain Reaction. In: Plastids - Methods and Protocols. (E. Maréchal, Ed.), Humana Press, New-York, USA, Methods in Molecular Biology, 2018, 1829: 273-278 |
Conte M, Lupette J, Seddiki K, Meï C, Dolch LJ, Gros V, Barette C, Rébeillé F, Jouhet J and Maréchal E
Screening for biologically annotated drugs that trigger triacylglycerol accumulation in the diatom Phaeodactylum.
Plant Physiology, 2018,
177(2): 532-552
De La Cruz EM, Blanchoin L and Ostap EM
Special Issue: Molecular mechanism of cellular motility and cytokenesis: Celebrating Thomas D. Pollard’s 50 years of cytoskeletal research.
Biophysical Reviews, 2018,
10(6): 1479-80
Cziesielski MJ, Liew YJ, Cui GX, Schmidt-Roach S, Campana S, Marondedze C and Aranda M
Multi-omics analysis of thermal stress response in a zooxanthellate cnidarian reveals the importance of associating with thermotolerant symbionts.
Proceedings of the Royal Society B-Biological Sciences, 2018,
285(1877)
Decelle J, Carradec Q, Pochon X, Henry N, Romac S, Mahe F, Dunthorn M, Kourlaiev A, Voolstra CR, Wincker P and de Vargas C
Worldwide occurrence and activity of the reef-building coral symbiont symbiodinium in the open ocean.
Current Biology, 2018,
28(22): 3625-3633
Dellero Y, Cagnac O, Rose S, Seddiki K, Cussac M, Morabito C, Lupette J, Cigliano RA, Sanseverino W, Kuntz M, Jouhet J, Maréchal E, Rébeillé F and Amato A
Proposal of a new thraustochytrid genus
Hondaea gen. nov. and comparison of its lipid dynamics with the closely related pseudo-cryptic genus
Aurantiochytrium.
Algal Research, 2018, 35: 125-141
Dellero Y, Rose S, Metton C, Morabito C, Lupette J, Jouhet J, Maréchal E, Rébeillé F and Amato A
Ecophysiology and lipid dynamics of a eukaryotic mangrove decomposer.
Environmental Microbiology, 2018,
20(8): 3057-3068
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Profiling histone modifications in synchronized floral tissues for quantitative resolution of chromatin and transcriptome dynamics.
Methods in Molecular Biology, 2018, 1675: 271-296 |
Fellows R, Russo CM, Silva CS, Lee SG, Jez JM, Chisholm JD, Zubieta C and Nanao MH
A multisubstrate reductase from
Plantago major: Structure-function in the short chain reductase superfamily.
Scientific Reports, 2018,
8(1): Article number 14796
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Chapter 7. Imaging plastids in 2D and 3D: Confocal and electron microscopy. In: Plastids - Methods and Protocols. (E. Maréchal, Ed.), Humana Press, New-York, USA, Methods in Molecular Biology, 2018, 1829: 113-122 |
| | Gros V and Jouhet J
Chapter 16. Quantitative assessment of the chloroplast lipidome. In: Plastids - Methods and Protocols. (E. Maréchal, Ed.), Humana Press, New-York, USA, Methods in Molecular Biology, 2018, 1829: 241-252 |
| | Gros V, Lupette J and Jouhet J
Chapter 15. Extraction and quantification of lipids from plant or algae. In: Plastids - Methods and Protocols. (E. Maréchal, Ed.), Humana Press, New-York, USA, Methods in Molecular Biology, 2018, 1829: 213-240 |
Hanchi M, Thibaud MC, Légeret B, Kuwata K, Pochon N, Beisson F, Cao A, Cuyas L, David P, Doerner P, Ferjani A, Lai F, Li-Beisson Y, Mutterer J, Philibert M, Raghothama KG, Rivasseau C, Secco D, Whelan J, Nussaume L and Javot H
The phosphate fast-responsive genes PECP1 and PPsPase1 affect phosphocholine and phosphoethanolamine content.
Plant Physiology, 2018,
176(4): 2943-2962
Hao X, Luo L, Jouhet J, Rébeillé F, Maréchal E, Hu H, Pan Y, Tan X, Chen Z, You L, Chen H, Wei F and Gong Y
Enhanced triacylglycerol production in the diatom
Phaeodactylum tricornutum by inactivation of a HotDog-fold thioesterase gene using TALEN-based targeted mutagenesis.
Biotechnology for Biofuels, 2018, 11:312
Hugouvieux V, Silva CS, Jourdain A, Stigliani A, Charras Q, Conn V, Conn SJ, Carles CC, Parcy F and Zubieta C
Tetramerization of MADS family transcription factors SEPALLATA3 and AGAMOUS is required for floral meristem determinacy in Arabidopsis.
Nucleic Acids Research, 2018,
46(10): 4966-4977
Hugouvieux V and Zubieta C
MADS transcription factors cooperate: Complexities of complex formation.
Journal of Experimental Botany, 2018,
9(8): 1821-1823
Jouhet J, Lupette J, Clerc O, Magneschi L, Bedhomme M, Collin S, Roy S, Maréchal E and Rébeillé F
LC-MS/MS versus TLC plus GC methods: Consistency of glycerolipid and fatty acid profiles in microalgae and higher plant cells and effect of a nitrogen starvation.
Correction PLoS One, 2018,
13(10): e0206397
Khan A, Fornes O, Stigliani A, Gheorghe M, Castro-Mondragon JA, van der Lee R, Bessy A, Cheneby J, Kulkarni SR, Tan G, Baranasic D, Arenillas DJ, Sandelin A, Vandepoele K, Lenhard B, Ballester B, Wasserman WW, Parcy F and Mathelier A
JASPAR 2018: Update of the open-access database of transcription factor binding profiles and its web framework.
Nucleic Acids Research, 2018,
46(D1): D260-D266
Khoury S, Canlet C, Lacroix MZ, Berdeaux O, Jouhet J and Bertrand-Michel J
Quantification of lipids: Model, reality, and compromise.
Biomolecules, 2018,
8(4): 174
Kwezi L, Wheeler JI, Marondedze C, Gehring C and Irving HR
Intramolecular crosstalk between catalytic activities of receptor kinases.
Plant Signaling & Behavior, 2018,
22: e1430544
Lai X, Verhage L, Hugouvieux V and Zubieta C
Pioneer factors in animals and plants—colonizing chromatin for gene regulation.
Molecules, 2018,
23(8): Article number 1914
Liebers M, Chevalier F, Blanvillain R and Pfannschmidt T
PAP genes are tissue- and cell-specific markers of chloroplast development.
Planta, 2018,
248(3): 629-46
Lupette J, Jaussaud A, Vigor C, Oger C, Galano JM, Réversat G, Vercauteren J, Jouhet J, Durand T and Maréchal E
Non-enzymatic synthesis of bioactive isoprostanoids in the diatom
Phaeodactylum fol-lowing oxidative stress.
Plant Physiology, 2018,
178(3): 1344-1357
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Chapter 13: Le potentiel des micro-algues pour la chimie verte et les bioénergies. In Microbiodiversité. Un nouveau regard. (Laurent Kalpa ed) Éditions Matériologiques, Paris, France, 2018, pp 372 |
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Chapter 1. Primary endosymbiosis: Emergence of the primary chloroplast and the chromatophore, two independent events. In: Plastids - Methods and Protocols. (E. Maréchal, Ed.), Humana Press, New-York, USA, Methods in Molecular Biology, 2018, 1829: 3-16 |
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Chapter 12. Analysis of the MTL supercomplex at contact sites between mitochondria and plastids. In: Plastids - Methods and Protocols. (E. Maréchal, Ed.), Humana Press, New-York, USA, Methods in Molecular Biology, 2018, 1829: 173-188 |
Marondedze C, Liu XY, Huang SH, Wong C, Zhou X, Pan XT, An HT, Xu N, Tian XC and Wong A
Towards a tailored indoor horticulture: A functional genomics guided phenotypic approach.
Horticulture Research, 2018,
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Chapter 6. Plastid transient and stable interactions with other cell compartments. In: Plastids - Methods and Protocols. (E. Maréchal, Ed.), Humana Press, New-York, USA, Methods in Molecular Biology, 2018, 1829: 87-109 |
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Chapter: Preparation of membrane fractions (envelope, thylakoids, grana and stroma lamellae) from Arabidopsis chloroplasts for quantitative proteomic investigations and other studies In Plant Membrane Proteomics, Edited by Mock, Hans-Peter, Matros, Andrea, Witzel, Katja, Series: Methods in Molecular Biology, Humana Press Inc., 2018, 1696, pp 117-136 |
Nziengui H, Lasok H, Kochersperger P, Ruperti B, Rébeillé F, Palme K and Ditengou FA
Root gravitropism is regulated by a crosstalk between para-aminobenzoic acid, ethylene, and auxin.
Plant Physiology, 2018, 178(3): 1370-1389
Peris L, Bisbal M, Martinez-Hernandez J, Saoudi Y, Jonckheere J, Rolland M, Sebastien M, Brocard J, Denarier E, Bosc C, Guerin C, Gory-Fauré S, Deloulme JC, Lanté F, Arnal I, Buisson A, Goldberg Y, Blanchoin L, Delphin C and Andrieux A
A key function for microtubule-associated-protein 6 in activity-dependent stabilisation of actin filaments in dendritic spines.
Nature Communications, 2018,
9(1): Article number 3775
Piredda R, Claverie JM, Decelle J, de Vargas C, Dunthorn M, Edvardsen B, Eikrem W, Forster D, Kooistra W, Logares R, Massana R, Montresor M, Not F, Ogata H, Pawlowski J, Romac S, Sarno D, Stoeck T and Zingone A
Diatom diversity through HTS-metabarcoding in coastal European seas.
Scientific Reports, 2018,
8: Article Number 18059
Pittera J, Jouhet J, Breton S, Garczarek L, Partensky F, Maréchal E, An Nguyen N, Dore H, Ratin M, Pitt FD, Scanlan DJ and Six C
Thermoacclimation and genome adaptation of the membrane lipidome in marine
Synechococcus.
Environmental Microbiology, 2018,
20(2): 612-631
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Assessing the environmental safety of transgenic plants: Honey bees as a case study. In: Transgenic Plants and Beyond. (M. Kuntz, Ed), Series: Advances in Botanical Research, Elsevier. 2018, 86: 111-167 |
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The ethical concerns about transgenic crops.
Biochemical Journal, 2018,
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Do galactolipid synthases play a key role in the biogenesis of chloroplast membranes of hgher plants?
Frontiers in Plant Science, 2018,
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Roelants C, Giacosa S, Pillet C, Bussat R, Champelovier P, Bastien O, Guyon L, Arnoux V, Cochet C and Filhol O
Combined inhibition of PI3K and Src kinases demonstrates synergistic therapeutic efficacy in clear-cell renal carcinoma.
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Chapter 5. The main functions of plastids. In: Plastids - Methods and Protocols. (E. Maréchal, Ed.), Humana Press, New-York, USA, Methods in Molecular Biology, 2018, 1829: 73-85 |
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Editorial: Structure and function of chloroplasts.
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Chapter 26. AT_CHLORO - The first step when looking for information about subplastidial localization of proteins. In: Plastids - Methods and Protocols. (E. Maréchal, Ed.), Humana Press, New-York, USA, Methods in Molecular Biology, 2018, 1829: 395-406 |
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Chapter 13. Isolation of plastid fractions from the diatoms Thalassiosira pseudonana and Phaeodactylum tricornutum. In: Plastids - Methods and Protocols. (E. Maréchal, Ed.), Humana Press, New-York, USA, Methods in Molecular Biology, 2018, 1829: 189-203 |
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Sequencing,
de novo assembly and annotation of the complete genome of a new Thraustochytrid species, strain CCAP 4062/3.
Genome Announcements, 2018,
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An outlook on lysine methylation of non-histone proteins in plants.
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69(19): 4569-4581
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Specific targeting of plant and apicomplexa parasite tubulin through differential screening using
in silico and assay-based approaches.
International Journal of Molecular Sciences, 2018,
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Differential impacts of FtsZ proteins on plastid division in the shoot apex of Arabidopsis.
Developmental Biology, 2018,
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Taddei L, Chukhutsina VU, Lepetit B, Stella GR, Bassi R, van Amerongen H, Bouly JP, Jaubert M, Finazzi G and Falciatore A
Dynamic changes between two LHCX-related energy quenching sites control diatom photoacclimation.
Plant Physiology, 2018,
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Tagliabue G, Kuntz M, Miller HI and Ammann K
A plea for the renewal of the ISBR.
Trends in Biotechnology, 2018,
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Cellular stretch reveals superelastic powers.
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Interactions between transcription factors and chromatin regulators in the control of flower development.
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Mapping of Adenovirus of serotype 3 fibre interaction to desmoglein 2 revealed a novel 'non-classical' mechanism of viral receptor engagement.
Scientific Reports, 2018,
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Variation in traction forces during cell cycle progression.
Biology of the Cell, 2018,
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Discovery of novel functional centers with rationally designed amino acid motifs.
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