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Publications of the team until 2018

Published on 19 February 2019

Chahtane H, Zhang B, Norberg M, LeMasson M, Thévenon E, Bako L, Benlloch R, Holmlund M, Parcy F, Nilsson O and Vachon G
LEAFY activity is post-transcriptionally regulated by BLADE ON PETIOLE2 and CULLIN3 in Arabidopsis.
New Phytologist, 2018, 220(2): 579-592

Chieb M, Liebers M, Chevalier F, Lerbs-Mache S, Blanvillain R and Pfannschmidt T
Chapter 17. Determination of the DNA/RNA-associated subproteome from chloroplasts and other plastid types. In: Plastids - Methods and Protocols. (E. Maréchal, Ed.), Humana Press, New-York, USA, Methods in Molecular Biology, 2018, 1829: 253-271

Engelhorn J, Wellmer F and Carles CC
Profiling histone modifications in synchronized floral tissues for quantitative resolution of chromatin and transcriptome dynamics.
Methods in Molecular Biology, 2018, 1675: 271-296

Hugouvieux V, Silva CS, Jourdain A, Stigliani A, Charras Q, Conn V, Conn SJ, Carles CC, Parcy F and Zubieta C
Tetramerization of MADS family transcription factors SEPALLATA3 and AGAMOUS is required for floral meristem determinacy in Arabidopsis.
Nucleic Acids Research, 2018, 46(10): 4966-4977

Liebers M, Chevalier F, Blanvillain R and Pfannschmidt T
PAP genes are tissue- and cell-specific markers of chloroplast development.
Planta, 2018, 248(3): 629-46

Vachon G, Engelhorn J and Carles CC
Interactions between transcription factors and chromatin regulators in the control of flower development.
Journal of Experimental Botany, 2018, 69(10): 2461-2471

Yan W, Chen D, Smaczniak C, Engelhorn J, Liu H, Yang W, Graf A, Carles CC, Zhou DX, Kaufmann K
Dynamic and spatial restriction of Polycomb activity by plant histone demethylases.
Nature Plants, 2018, 4(9): 681-689


Denay G, Vachon G, Dumas R, Zubieta C and Parcy F
Plant SAM-domain proteins start to reveal their roles.
Trends in Plant Science, 2017, 22(8): 718-725

Engelhorn J, Blanvillain R, Kröner C, Parrinello H, Rohmer M, Posé D, Ott F, Schmid M and Carles CC
Dynamics of H3K4me3 chromatin marks prevails over H3K27me3 for gene regulation during flower morphogenesis in Arabidopsis thaliana.
Epigenomes, 2017, 1(2): 8
CEA Highlight/Fait marquant

Grübler B, Merendino L, Twardziok SO, Mininno M, Allorent G, Chevalier F, Liebers M, Blanvillain R, Mayer K, Lerbs-Mache S, Ravanel S and Pfannschmidt T
Light and plastid signals regulate different sets of genes in the albino mutant pap7-1.
Plant Physiology, 2017, 175(3): 1203-1219

Liebers M, Grübler B, Chevalier F, Lerbs-Mache S, Merendino L, Blanvillain R and Pfannschmidt T
Regulatory shifts in plastid transcription play a key role in morphological conversions of plastids during plant development.
Frontiers in Plant Science, 2017, 8: 23


Chahtane H, Denay G, Engelhorn J, Monniaux M, Moyroud E, Moreau F, Carles C, Tichtincky G, Zubieta C and Parcy F
Floral development: An integrated view. In From Molecules to Living Organisms: An Interplay Between Biology and Physics: Lecture Notes of the Les Houches School of Physics: Volume 102, July 2014 (Lecture Notes of the Les Houches Summer School), Session CII, (E. Pebay-Peyroula, H. Nury, F. Parcy, R.W.H. Ruigrok, C. Ziegler and L.F. Cugliandolo, Eds) Oxford University Press, 2014, pp 464

Mandel T, Candela H, Landau U, Asis L, Zelinger E, Carles CC and Williams LE
Differential regulation of meristem size, morphology and organization by the ERECTA, CLAVATA and class III HD-ZIP pathways.
Development, 2016, 143(9): 1612-1622

Moreau F, Thevenon E, Blanvillain R, Lopez-Vidriero I, Franco-Zorrilla JM, Dumas R, Parcy F, Morel P, Trehin C and Carles CC
The Myb-domain protein ULTRAPETALA1 INTERACTING FACTOR 1 controls floral meristem activities in Arabidopsis.
Development, 2016, 143(7): 1108-1119


Chevalier F, Ghulam MM, Rondet D, Pfannschmidt T, Merendino L and Lerbs-Mache S
Characterization of the psbH precursor RNAs reveals a precise endoribonuclease cleavage site in the psbT/psbH intergenic region that is dependent on psbN gene expression.
Plant Molecular Biology, 2015, 88(4-5): 357-367

Dietzel L, Glasser C, Liebers M, Hiekel S, Courtois F, Czarnecki O, Schlicke H, Zubo Y, Borner T, Mayer K, Grimm B and Pfannschmidt T
Identification of early nuclear target genes of plastidial redox signals that trigger the long-term response of Arabidopsis to light quality shifts.
Molecular Plant, 2015, 8(8): 1237-1252

Ó'Maoiléidigh DS, Thomson B, Raganelli A, Wuest SE, Ryan PT, Kwa?niewska K, Carles CC, Graciet E and Wellmer F
Gene network analysis of Arabidopsis thaliana flower development through dynamic gene perturbations.
Plant Journal, 2015, 83(2): 344-358

Pfalz J, Holtzegel U, Barkan A, Weisheit W, Mittag M and Pfannschmidt T
ZmpTAC12 binds single-stranded nucleic acids and is essential for accumulation of the plastid-encoded polymerase complex in maize.
New Phytologist, 2015, 206(3): 1024-1037

Pfalz J and Pfannschmidt T
Plastid nucleoids: Evolutionary reconstruction of a DNA/protein structure with prokaryotic ancestry.
Frontiers in Plant Science, 2015, 6: 220

Pfannschmidt T, Blanvillain R, Merendino L, Courtois F, Chevalier F, Liebers M, Grübler B, Hommel E and Lerbs-Mache S
Plastid RNA polymerases: Orchestration of enzymes with different evolutionary origins controls chloroplast biogenesis during the plant life cycle.
Journal of Experimental Botany, 2015, 66(22): 6957-6973


Engelhorn J, Blanvillain R and Carles CC
Gene activation and cell fate control in plants: A chromatin perspective.
Cellular and Molecular Life Sciences, 2014, 71(16): 3119-3137

Engelhorn J, Moreau F, Fletcher JC and Carles CC
ULTRAPETALA1 and LEAFY pathways function independently in specifying identity and determinacy at the Arabidopsis floral meristem.
Annals of Botany, 2014, 114(7): 1497-1505

Gläßer C, Haberer G, Finkemeier I, Pfannschmidt T, Kleine T, Leister D, Dietz KJ, Häusler RE, Grimm B and Mayer KF
Meta-Analysis of Retrograde Signaling in Arabidopsis thaliana reveals a core module of genes embedded in complex cellular signaling networks.
Molecular Plant, 2014, 7(7): 1167-1190

Mandel T, Moreau F, Kutsher Y, Fletcher JC, Carles CC and Williams LE
The ERECTA receptor kinase regulates Arabidopsis shoot apical meristem size, phyllotaxy and floral meristem identity.
Development, 2014, 141(4): 830-841

Schröter Y, Steiner S, Weisheit W, Mittag M and Pfannschmidt T
A purification strategy for analysis of the DNA/RNA-associated sub-proteome from chloroplasts of mustard cotyledons.
Frontiers in Plant Science, 2014, 5: 557


Monfared MM, Carles CC, Rossignol P, Pires HR and Fletcher JC
The ULT1 and ULT2 trxG genes play overlapping roles in Arabidopsis development and gene regulation.
Molecular Plant, 2013, 6(5): 1564-1579


Smaczniak C, Immink RG, Muiño JM, Blanvillain R, Busscher M, Busscher-Lange J, Dinh QD, Liu S, Westphal AH, Boeren S, Parcy F, Xu L, Carles CC, Angenent GC and Kaufmann K
Characterization of MADS-domain transcription factor complexes in Arabidopsis flower development.
Proceedings of the National Academy of Sciences, 2012, 109(5): 1560-1565


Rodor J, Jobet E, Bizarro J, Vignols F, Carles C, Suzuki T, Nakamura K and Echeverria M
AtNUFIP, an essential protein for plant development, reveals the impact of snoRNA gene organisation on the assembly of snoRNPs and rRNA methylation in Arabidopsis thaliana.
Plant Journal, 2011, 65(5): 807-819


Carles CC and Fletcher JC
Missing links between histones and RNA Pol II arising from SAND?
Epigenetics, 2010, 5(5): 381-385

Carles CC, Ha CM, Jun JH, Fiume E and Fletcher JC
Analyzing shoot apical meristem development.
Methods in Molecular Biology, 2010, 655: 105-129


Carles CC and Fletcher JC
The SAND domain protein ULTRAPETALA1 acts as a trithorax group factor to regulate cell fate in plants.
Genes & Development, 2009, 23: 2723-2728


Carles CC, Choffnes-Inada D, Reville K, Lertpiriyapong K and Fletcher JC
ULTRAPETALA1 encodes a SAND domain putative transcriptional regulator that controls shoot and floral meristem activity in Arabidopsis.
Development, 2005, 132(5): 897-911

Williams L*, Carles CC*, Osmont KS* and Fletcher JC
A database analysis method identifies an endogenous trans -acting short-interfering RNA that targets the Arabidopsis ARF2, ARF3, and ARF4 genes.
Proceedings of the National Academy of Sciences USA, 2005, 102(27): 9703-9708


Carles CC, Lertpiriyapong K, Reville K and Fletcher JC
The ULTRAPETALA1 gene functions early in Arabidopsis development to restrict shoot apical meristem activity, and acts through WUSCHEL to regulate floral meristem determinacy.
Genetics, 2004, 167(4): 1893-903


Carles CC and Fletcher JC
Shoot apical meristem maintenance: The art of a dynamic balance.
Trends in Plant Science, 2003, 8(8): 394-401

Sharma VK, Carles C and Fletcher JC
Maintenance of stem cell populations in plants.
Proceedings of the National Academy of Sciences USA, 2003, 100(Suppl 1): 11823-11829