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Laboratory Publications in 2009

Published on 4 January 2019



Adam V, Carpentier P, Violot S, Lelimousin M, Darnault C, Nienhaus GU and Bourgeois D
Structural basis of X-ray-induced transient photobleaching in a photoactivatable green fluorescent protein.
Journal of the American Chemical Society, 2009, 131(50): 18063-18065

Atteia A, Adrait A, Brugiere S, Tardif M, van Lis R, Deusch O, Dagan T, Kuhn L, Gontero B, Martin W, Garin J, Joyard J and Rolland N
A proteomic survey of Chlamydomonas reinhardtii mitochondria sheds new light on the metabolic plasticity of the organelle and on the nature of the {alpha}-proteobacterial mitochondrial ancestor.
Molecular Biology and Evolution, 2009, 26(7): 1533-1548

Bathellier C, Tcherkez G, Mauve C, Bligny R, Gout E and Ghashghaie J
On the resilience of nitrogen assimilation by intact roots under starvation, as revealed by isotopic and metabolomic techniques.
Rapid Communications in Mass Spectrometry, 2009, 23(18): 2847-2856

Bathellier C, Tcherkez G, Bligny R, Gout E, Cornic G and Ghashghaie J
Metabolic origin of the δ13C of respired CO2 in roots of Phaseolus vulgaris.
New Phytologist, 2009, 181(2): 387-399

Blanchoin L and Boujemaa-Paterski R
Inhibitors target actin nucleators.
Chemistry and Biology, 2009, 16(11): 1125-1126

Bougdour A, Maubon D, Baldacci P, Ortet P, Bastien O, Bouillon A, Barale JC, Pelloux H, Menard R and Hakimi MA
Drug-inhibition of HDAC3 and epigenetic control of differentiation in Apicomplexa parasites.
Journal of Experimental Medicine, 2009, 206(4): 953-966

Bourguignon J, Vavasseur A, Sarret G, Hurtevent P and Henner P
Comportement des espèces chimiques dans la biosphère : spéciation, biodisponibilité, transfert dans le vivant, "transfert aux plantes et biodistribution" in Toxicologie Nucléaire Environnementale et Humaine, Lavoisier, 2009, pp 99-113

Boyer F, Combes F, Bourguignon J and Vandenbrouck Y
A graph-based approach for extracting transcriptional regulatory modules from a large microarray compendium: An application to the transcriptional response of Arabidopsis thaliana under stress condition in TIC Signal Processing Proceedings Series, 2009, vol. 48. pp 23-27

Carpentier P, Violot S, Blanchoin L and Bourgeois D
Structural basis for the phototoxicity of the fluorescent protein KillerRed.
FEBS Letters, 2009, 583(17): 2839-2842

Curien G, Bastien O, Robert-Genthon M, Cornish-Bowden A, Cardenas ML and Dumas R
Understanding regulation of aspartate metabolism with a model based on measured kinetic parameters.
Molecular Systems Biology, 2009, 5: 271

De Beer TAP, Wells GA, Burger PB, Joubert J, Maréchal E, Birkholtz L and Louw AI
Antimalarial drug discovery: in silico structural biology and rational drug design.
Infectious Disorders Drug Targets, 2009, 9(3): 304-318

Dulermo T, Bligny R, Gout E and Cotton P
Amino acid changes during sunflower infection by the necrotrophic fungus B. cinerea.
Plant Signaling and Behavior, 2009, 4(9): 859-861

Dulermo T, Rascle C, Chinnici G, Gout E, Bligny R and Cotton P
Dynamic carbon transfer during pathogenesis of sunflower by the necrotrophic fungus Botrytis cinerea: From plant hexoses to mannitol.
New Phytologist, 2009, 183(4): 1149-1162

Florent I, Porcel BM, Guillaume E, Da Silva C, Artiguenave F, Maréchal E, Brehelin L, Gascuel O, Charneau S, Wincker P and Grellier P
A Plasmodium falciparum FcB1-schizont-EST collection providing clues to schizont specific genes structure and polymorphism.
BMC Genomics, 2009, 10: 235

Gandhi M, Achard V, Blanchoin L and Goode BL
Coronin switches roles in actin disassembly depending on the nucleotide state of actin.
Molecular Cell, 2009, 34(3): 364-374

Glade N, Ben-Amor H and Bastien O
Trail Systems as fault tolerant wires and their use in bio-processors.
Modelling Complex Biological Systems in the Context of Genomic, 2009, 85-119

Hoang TM, Favier B, Valette A, Barette C, Nguyen CH, Lafanechere L, Grierson DS, Dimitrov S and Molla A
Benzo[e]pyridoindoles, novel inhibitors of the aurora kinases.
Cell Cycle, 2009, 8(5): 765-772

Hugouvieux V, Dutilleul C, Jourdain A, Reynaud F, Lopez V and Bourguignon J
Arabidopsis putative selenium-binding Protein1 expression is tightly linked to cellular sulfur demand and can reduce sensitivity to stresses requiring glutathione for tolerance.
Plant Physiology, 2009, 151(2):768-81

Jouhet J, Dubots E, Maréchal E and Block MA
Lipid trafficking in plant photosynthetic cells In Lipids in Photosynthesis, essential and regulatory functions, Edited by N.M. Wada, Springer Netherlands, 2009, pp 349-372

Joyard J, Ferro M, Masselon C, Seigneurin-Berny D, Salvi D, Garin J and Rolland N
Chloroplast proteomics and the compartmentation of plastidial isoprenoid biosynthetic pathways.
Molecular Plant, 2009, 2: 1154-1180

Krammer EM, Ravaud S, Dehez F, Frelet-Barrand A, Pebay-Peyroula E and Chipot C
High-chloride concentrations abolish the binding of adenine nucleotides in the mitochondrial ADP/ATP carrier family.
Biophysical Journal, 97(10): L25-L27

Labarre J, Forestier C and Bourguignon J
Mécanisme d'interactions aux niveaux moléculaire et cellulaire, Mécanismes moléculaires, « Mécanismes de détoxication du cadmium chez les eucaryotes » in Toxicologie Nucléaire Environnementale et Humaine, Lavoisier, 2009, pp 215-226

Maréchal E
In silico strategies for target discovery.
Infection Genetics and Evolution, 2009, 9(3): 370-371

Moyroud E, Reymond MCA, Hamès C, Parcy F and Scutt CP
The analysis of entire gene promoters by Surface Plasmon Resonance.
Plant Journal, 2009, 59(5): 851–858

Moyroud E, Tichtinsky G and Parcy F
The LEAFY floral regulators in angiosperms: Conserved proteins with diverse roles.
Journal of Plant Biology, 2009, 52: 177-185 (Revue sur invitation)

Parcy P
La floraison In Biologie végétale : croissance et développement, Edited by J.F. Morot-Gaudry and R. Prat, 2009, vol.2, chap.6. Dunod, pp 157-181

Peris L, Wagenbach M, Lafanechère L, Brocard J, Moore AT, Kozielski F, Job D, Wordeman L and Andrieux A
Motor-dependent microtubule disassembly driven by tubulin tyrosination.
Journal of Cellular Biology, 2009, 185(7): 1159-1166

Polge C, Jaquinod M, Holzer F, Bourguignon J, Walling L and Brouquisse R
Evidence for the existence in Arabidopsis thaliana of the proteasome proteolytic pathway: Activation in response to cadmium.
Journal of Biological Chemistry, 2009, 284(51): 35412-35424

Pratt J, Boisson AM, Gout E, Bligny R, Douce R and Aubert S
Phosphate (Pi) starvation effect on the cytosolic Pi concentration and Pi exchanges across the tonoplast in plant cells: An in vivo 31P-nuclear magnetic resonance study using methylphosphonate as a Pi analog.
Plant Physiology, 2009, 151(3):1646-1657

Ricroch A, Berge JB and Kuntz M
Is the German suspension of MON810 maize cultivation scientifically justified?
Transgenic Research, 2010, 19(1): 1-12

Rippert P, Puyaubert J, Grissolet D, Derrier L and Matringe M
Tyrosine and phenylalanine are synthesized within the plastids in Arabidopsis.
Plant Physiology, 2009, 149(3): 1251-1260

Rivasseau C, Seemann M, Boisson AM, Streb P, Gout E, Douce R, Rohmer M and Bligny R
Accumulation of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (MEcDP) in illuminated plant leaves at supraoptimal temperatures reveals a bottleneck of the prokaryotic methylerythritol 4-phosphate (MEP) pathway of isoprenoid biosynthesis.
Plant Cell and Environment, 2009, 32(1): 82-92

Rolland N, Atteia A, Decottignies P, Garin J, Hippler M, Kreimer G, Lemaire SD, Mittag M and Wagner V
Chlamydomonas proteomics.
Current Opinion in Microbiology, 2009, 12(3): 285-291

Rolland N, Ferro M, Seigneurin-Berny D, Garin J, Block MA and Joyard J
The Chloroplast envelope proteome and lipidome. In The Chloroplast - Interactions with the Environment (Anna-Stina Sandelius and Henrik Aronsson, eds.), Plant cell monograph series (David G Robinson, series editor). Springer Verlag, 2009, Vol.13 pp. 41-88

Saidani N, Grando D, Valadie H, Bastien O and Marechal E
Potential and limits of in silico target discovery-Case study of the search for new antimalarial chemotherapeutic targets.
Infection, Genetics and Evolution, 2009, 9(3): 359-367

Sautel CF, Ortet P, Saksouk N, Kieffer S, Garin J, Bastien O and Hakimi MA
The histone methylase KMTox interacts with the redox-sensor peroxiredoxin-1 and targets genes involved in Toxoplasma gondii antioxidant defences.
Molecular Microbiology, 2009, 71(1): 212-226

Souidi M, Bertho JM, Pradines C, Beaugelin-Seiller K, Ansoborlo E and Bourguignon J
Synthèse par élément chimique, « le Césium » in Toxicologie Nucléaire Environnementale et Humaine, Lavoisier, 2009, pp 469-485

Staiger CJ, Sheahan MB, Khurana P, Wang X, McCurdy DW, Blanchoin L
Actin filament dynamics are dominated by rapid growth and severing activity in the Arabidopsis cortical array.
Journal of Cell Biology, 2009, 184(2): 269-280

Tcherkez G, Mahé A, Gauthier P, Mauve C, Gout E, Bligny R, Cornic G and Hodges M
In folio respiratory fluxomics revealed by 13C isotopic labeling and H/D isotope effects highlight the noncyclic nature of the tricarboxylic acid "cycle" in illuminated leaves.
Plant Physiology, 2009, 151(2):620-630

Terrapon N, Gascuel O, Maréchal E and Bréehélin L
Detection of new protein domains using co-occurrence: Application to Plasmodium falciparum.
Bioinformatics, 2009, 25(23): 3077-3083

Van Wilder V, De Brouwer V, Loizeau K, Gambonnet B, Albrieux C, Van Der Straeten D, Lambert WE, Douce R, Block MA, Rebeille F and Ravanel S
C1 metabolism and chlorophyll synthesis: The Mg-protoporphyrin IX methyltransferase activity is dependent on the folate status.
New Phytologist, 2009, 182: 137-145

Vidali L, van Gisbergen PA, Guérin C, Franco P, Li M, Burkart GM, Augustine RC, Blanchoin L and Bezanilla M
Rapid formin-mediated actin-filament elongation is essential for polarized plant cell growth.
Proceedings of the National Academy of Sciences USA, 2009, 106(32):13341-13346

Violot S, Carpentier P, Blanchoin L and Bourgeois D
Reverse pH-dependence of chromophore protonation explains the large stokes shift of the red fluorescent protein mKeima.
Journal of the American Chemical Society, 2009, 131(30): 10356-10357